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Species belonging to selected taxon:

Bruguiera gymnorhiza



ABOUT THIS RECORD

ID: MNEST045004
species: Bruguiera gymnorhiza
source: microPC, original name: miR156

Taxonomy by NCBI:
Bruguiera gymnorhiza Bruguiera Rhizophoraceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAGAAGATAGAGAGCACA

miRNA*
TGCTCTCTATGCTTCTG

mismatches: 0
bulges: 1

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pre-miRNA
CAGAAGATAGAGAGCACAGATGATGATGTGCAATTTTTGGATTCTGCATCTCACTCCTTTGTGCTCTCTATGCTTCTG

dot-bracket secondary structure
((((((((((((((((((((.(((((.(((((............))))).))).)).)))))))))))))).))))))


SIMILARITIES
miRBase rco-MIR156h: 7e-23

PMRD ptc-miRf10223-akr: 1e-21

microPC miR157: 5e-39
UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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